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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26449703
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTSSMPQNL SLFGFSPLKS SSFALILRPF SLYPPIFASS SPAPSRRPPR TAGYRRSGPS  60
   61 PPRRKWSSFE EQKRKGRSPM EKDKAISFNH SSDSFEFNKR RAEGLDKVDK PKKNLKRNTR 120
  121 TLNPTNTIAY VQILGTGMDT QDTSPSVLLF FDKQRFIFNA GEGLQRFCTE HKIKLSKVDH 180
  181 IFLSRVCSET AGGLPGLLLT LAGIGEQGLS VNVWGPSDLK YLVDAMRSFI PRAAMVHTRS 240
  241 FGPSLNISDS APQIGLSKPK DDAYVLVDDE VVKISAILLE PSRLEESGSK PGETAVIYVC 300
  301 ELPEIKGKFD PKKAMALGLR AGPKYSYLQS GQSVKSDFKD ITVHPSDVMG PSVPGPVVLL 360
  361 VDCPTESHAE ELLSIPSMKT YYSCLDNSTD GAKLVNCIIH LSPASVTNSS TYRSWMKRFH 420
  421 SAQHILAGHE AKNMEFPILR ASSRITARLN YLCPQFFPAP GFWSHQHDNN SINPTSLSKC 480
  481 FDSNLGESIS AENLLKFTLR PHGNLGVDRS SIPSRLTALR VMDELLSEIP EISSKTEEIK 540
  541 QLWNGQHNKM MIEEPWLGES TVPSCLENIR RDDMEIVLLG TGSSQPSKYR NVTAIYIDLF 600
  601 SRGSILLDCG EGTLGQLKRR YGLEGADEAV RNLRCIWISH IHADHHTGLA RILARRRELL 660
  661 KGLAHEPAIV VGPRSLKKFL DAYQRLEDLD MEFLDCRNTT TTSWASVETS RPEKNTSSGN 720
  721 AEGSLFSKGS LMQSIYKRPS SPLTDNSSAL PFLKKLKKVL GEMGLEHLIS FPVVHCPQAF 780
  781 GVSLKAAERK NIAGDEIPGW KMVYSGDTRP CPEMVEASKG ATVLIHEATF EDALVEEAVA 840
  841 KNHSTTKEAI KVGSSAGVYR TVLTHFSQRY PKIPVIDESH MHNTCIAFDM MSINMADLHV 900
  901 LPKILPYFKT LFRNQVVEEE EEEEETDDDS LIRDKVPSFF IN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle