YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30687094, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVAVIGSGI SGLGSAYVLA NQGVKEVVLY EKEESLGGHA KTVRFDGVDL DLGFMVFNRV  60
   61 TYPNMIEFFE NLGVEMEVSD MSFAVSLDNG KGCEWGSRNG VSGLFAQKKN VLNPYFWQMI 120
  121 REIVRFKEDV LNYIEKLEGN PDIDRKETLG EFLNTRGYSE LFQQAYLVPI CGSIWSCPSD 180
  181 GVLSFSAYSV LSFCCNHHLL QIFGRPQWLT VAGRSQTYVA KVRAELERLG CKIRTSCDVK 240
  241 SVSTSENGCV TVTSGDGSEE VFDRCILAMH APDALRLLGE EVTFDESRVL GAFQYVYSDI 300
  301 YLHHDIDLMP RNKAAWSAWN FLGSTEKKVC VTYWLNILQN LGENSEPFFV TLNPDETPKK 360
  361 ALLKWTTGHP VPSVAASIAS QELHQIQGKR NIWFCGAYQG YGFHEDGLKA GMAAARGLLG 420
  421 KETALLNNPR HMVPSLTETG ARLFVTRFLG QFISTGSVTI LEEGGTMFTF GGKDSTCPLK 480
  481 SILKIHSPQF YWKVMTQADL GLADAYINGD FSFVDKESGL LNLIMILIAN RDTKSNLTKK 540
  541 RGWWTPMFLT AGLASAKYFL KHVSRQNTLT QARRNISRHY DLSNELFGLF LDDTMTYSSA 600
  601 VFKSDDEDLR TAQMRKISLL IDKARIEKDH EVLEIGCGWG TLAIEVVRRT GCKYTGITLS 660
  661 IEQLKYAEEK VKEAGLQDRI TFELRDYRQL SDAHKYDRII SCEMLEAVGH EFMEMFFSRC 720
  721 EAALAEDGLM VLQFISTPEE RYNEYRLSSD FIKEYIFPGA CVPSLAKVTS AMSSSSRLCI 780
  781 EHVENIGIHY YQTLRLWRKN FLERQKQIMA LGFDDKFVRT WEYYFDYCAA GFKTRTLGDY 840
  841 QLVFSRPGNV AAFADSYRGF PSAYCVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle