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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25454673, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIFSIRIFF IVAVICIAFV LPVNYYGQPM VHKEIHLESS EVFTIENLKE GSKWLWVHCL  60
   61 ALYIITSAAC LLLYFEYSTI AKMRLGHITG CASKPSQFTV LIRAIPWSPE QSYSDTLSKF 120
  121 FTNYYSSSYV SHQMVYHNGI IQRLLRDAER MCQTLKHVSP EINCKPSLRP CTFCGGPTAT 180
  181 SSFHILSNEA DSVKGMELGE LTMTTTTTEQ ERSAAFVFFK TRYDALVVSE VLQSSNPMLW 240
  241 VTDLAPEPHD VYWKNLNIPY RQLWIRKIAT LVGAVAFMFV FLIPVTFIQG LTQLVQLSHA 300
  301 FPFLRGILSK NFINQVITGY LPSVILILFF YAVPPLMMYF SALEGCISRS IRKKSACIKV 360
  361 LYFTIWNVFF VNILSGSVIR QLNVFSSVRD IPAQLARAVP TQAGFFMTYC FTSGWASLAC 420
  421 EIMQPMALIW NLVAKVVTKN EDESYETLRF PYHTEIPRLL LFGLLGFTNS VIAPLILPFL 480
  481 LIYFFLAYLI YKNQILNVYI TKYESGGQYW PIFHNTTIFS LILTQIIALG FFGLKLSTVA 540
  541 SGFTIPLILL TLLFSEYCRQ RFAPIFNKNP AQVLIDMDRA DEISGKMEEL HKKLHNVYSQ 600
  601 IPLHSQKSSS KAECSNPFKK QELPDPEKLK PEEGDAIAKE LWGFQGNESG QEHDTKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle