YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42557351
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPESNLNGAY YGPSIPPPSK SYHRHGRGSS CNPCSCLFGC LCNCIFQIIF TILIVLGVIA  60
   61 LVLWLVLRPN KVKFYVTDAT LTQFDLSTAN NTLYYDLALN MTIRNPNKRI GIYYDSIEAR 120
  121 GMYKGERFAS QNLEPFYQGH KNTSSLHPVL KGQSLVLLGD REKSNYNNEK NSGVYDIEMK 180
  181 LYMRIRLKIG WIKTHKIKPK IECDIKVPLE SNGRSSANFE ETRCHLDW

Type	Start	End	Confidence
Cytoplasmic	1	43	0.53
Transmembrane Helix	44	67	0.88
Non-Cytoplasmic	68	228	0.57