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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4996361
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSSMGMNSL VFSMALQPCR LRPLAQMRLP VSIPTTLAGK DKTSSSTVPF LEPSPCRFNR  60
   61 RCQEPLPLLR SGKISETPTK TQANPSYGHV TQLRTQLKQW TKGTKTIDDY MQGLVTRFDQ 120
  121 LALLGKPMDH DEQVERVLEN LPEEYKPVID QIAAKDTPPT LTEIHERLLN HESKILAVSS 180
  181 ATVIPITANA VSHRNTTTTT NNNNGNRNNR YDNRNNNNNS KPWQQSSTNF HPNNNQSKPY 240
  241 LGKCQICGVQ GHSAKRCSQL QHFLSSVNSQ QPPSPFTPWQ PRANLALGSP YSSNNWLLDS 300
  301 GATHHITSDF NNLSLHQPYT GGDDVMVADG STIPISHTGS TSLSTKSRPL NLHNILYVPN 360
  361 IHKNLISVYR LCNANGVSVE FFPASFQVKD LNTGVPLLQG KTKDELYEWP IASSQPVSLF 420
  421 ASPSSKATHS SWHARLGHPA PSILNSVISN YSLSVLNPSH KFLSCSDCLI NKSNKVPFSQ 480
  481 STINSTRPLE YIYSDVWSSP ILSHDNYRYY VIFVDHFTRY TWLYPLKQKS QVKETFITFK 540
  541 NLLENRFQTR IGTFYSDNGG EFVALWEYFS QHGISHLTSP PHTPEHNGLS ERKHRHIVET 600
  601 GLTLLSHASI PKTYWPYAFA VAVYLINRLP TPLLQLESPF QKLFGTSPNY DKLRVFGCAC 660
  661 YPWLRPYNQH KLDDKSRQCV FLGYSLTQSA YLCLHLQTSR LYISRHVRFD ENCFPFSNYL 720
  721 ATLSPVQEQR RESSCVWSPH TTLPTRTPGL PAPSGSDPHH AATPPSSPSA PFRNSQVSSS 780
  781 NRESYFSSSF PSSPEPTAPR QNGPQPKTQP TQTQTQTHSS QNTSQNNPTN ESPSQLAQSL 840
  841 STPAQSSSSS PSPTTSASSS STSPTPPSIL IHPPPPLAQI VNNNNQAPLN THSMGTRAKA 900
  901 GIIKPNPKYS LAVSLAAESE PRTAIQALKD ERWRNAMGSE INAQIGNHTW DLVPPPPSHV 960
  961 TIVGCRWIFT KKYNSDGSLN RYKARFVAKG YNQRPGLDYA ETFSPVIKST SIRIVLGVAV1020
 1021 DRSWPIRQLD VNNAFLQGTL TDDVYMSQPP GFIDKDRPNY VCKLRKALYG LKQAPRAWYV1080
 1081 ELRNYLLTIG FVNSVSDTSL FVLQRGKSIV YMLVYVDDIL ITGNDPTLLH NTLDNLSQRF1140
 1141 SVKDHEELHY FLGIEAKRVP TGLHLSQRRY ILDLLARTNM ITAKPVTTPM APSPKLSLYS1200
 1201 GTKLTDPTEY RGIVGSLQYL AFTRPDISYA VNRLSQFMHM PTEEHLQALK RILRYLAGTP1260
 1261 NHGIFLKKGN TLSLHAYSDA DWAGDKDDYV STNGYIVYLG HHPISWSSKK QKGVVRSSTE1320
 1321 AEYRSVANTS SEMQWICSLL TELGIRLTRP PVIYCDNVGA TYLCANPVFH SRMKHIAIDY1380
 1381 HFIRNQVQSG ALRVVHVSTH DQLADTLTKP LSRTAFQNFA SKIGVTRVPP S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle