YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9758996
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIILIRILDG QLDLSLFRRS LFSPLVFVSP LILCLEQSQI HQTLLLPPTF VCLDLRLLLP  60
   61 IKLKMDTSRD DDFTFSKVSP PDSEVKDLAS DVGSITLKDG LDQQKSNGLI WKDKSLPPKE 120
  121 ETIGSLSFTV TDSSSSKKQS NESSETFKTP ARKPITRTKV PFEKGYSQMD WLKLTRTHPD 180
  181 LAGLKGESNK RLIPMDEVKK HRTGDSMWTV LKGRVYNISP YMNFHPGGVD MLMKAVGRDG 240
  241 TLLFNKYHAW VNVDILLEKC LVGVLDDTKV KKQEP

Type	Start	End	Confidence
Cytoplasmic	1	15	0.74
Transmembrane Helix	16	35	0.67
Non-Cytoplasmic	36	275	0.93