YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49653203, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCCCECLSDI CLIVVSVFFP PLPVWIRRGL CTCDSLINIL LCMLGYFPGL IHSWYIIAKY  60
   61 PPYAISHESK VYYVYQTRPD LENQYGGGTS RTSRDSRNPL HHHHHHHHHH REPVDNEPLP 120
  121 IANPTYGSTS DRNDRNETSP PAYSEIGK

Type	Start	End	Confidence
Cytoplasmic	1	34	0.46
Transmembrane Helix	35	56	0.75
Non-Cytoplasmic	57	148	0.64