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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9758302
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGCVSVSIS CDQLTKNVCS CLNRNGDYIH GLEENLTALQ RALEQIEQRR EDLLRKILSE  60
   61 ERRGLQRLSV VQGWVSKVEA IVPRVNELVR MRSVQVQRLC LCGFCSKNLV SSYRYGKRVM 120
  121 KMIEEVEVLR YQGDFAVVAE RVDAARVEER PTRPMVAMDP MLESAWNRLM EDEIGILGLH 180
  181 GMGGVGKTTL LSHINNRFSR VGGEFDIVIW IVVSKELQIQ RIQDEIWEKL RSDNEKWKQK 240
  241 TEDIKASNIY NVLKHKRFVL LLDDIWSKVD LTEVGVPFPS RENGCKIVFT TRLKEICGRM 300
  301 GVDSDMEVRC LAPDDAWDLF TKKVGEITLG SHPEIPTVAR TVAKKCRGLP LALNVIGETM 360
  361 AYKRTVQEWR SAIDVLTSSA AEFSGMEDEI LPILKYSYDN LKSEQLKLCF QYCALFPEDH 420
  421 NIEKNDLVDY WIGEGFIDRN KGKAENQGYE IIGILVRSCL LMEENQETVK MHDVVREMAL 480
  481 WIASDFGKQK ENFIVQAGLQ SRNIPEIEKW KVARRVSLMF NNIESIRDAP ESPQLITLLL 540
  541 RKNFLGHISS SFFRLMPMLV VLDLSMNRDL RHLPNEISEC VSLQYLSLSR TRIRIWPAGL 600
  601 VELRKLLYLN LEYTRMVESI CGISGLTSLK VLRLFVSGFP EDPCVLNELQ LLENLQTLTI 660
  661 TLGLASILEQ FLSNQRLASC TRALRIENLN PQSSVISFVA TMDSLQELHF ADSDIWEIKV 720
  721 KRNETVLPLH IPTTTTFFPN LSQVSLEFCT RLRDLTWLIF APNLTVLRVI SASDLKEVIN 780
  781 KEKAEQQNLI PFQELKELRL ENVQMLKHIH RGPLPFPCLQ KILVNGCSEL RKLPLNFTSV 840
  841 PRGDLVIEAH KKWIEILEWE DEATKARFLP TLKVLSLAFI CQNFFLIIHS FGSYSLFWMF 900
  901 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle