YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IDI1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTASLFSFP SFHLRSLLPS LSSSSSSSSS RFAPPRLSPI RSPAPRTQLS VRAFSAVTMT  60
   61 DSNDAGMDAV QRRLMFEDEC ILVDENDRVV GHDTKYNCHL MEKIEAENLL HRAFSVFLFN 120
  121 SKYELLLQQR SKTKVTFPLV WTNTCCSHPL YRESELIEEN VLGVRNAAQR KLFDELGIVA 180
  181 EDVPVDEFTP LGRMLYKAPS DGKWGEHEVD YLLFIVRDVK LQPNPDEVAE IKYVSREELK 240
  241 ELVKKADAGD EAVKLSPWFR LVVDNFLMKW WDHVEKGTIT EAADMKTIHK L

Type	Start	End	Confidence
Signal Peptide	1	29	0.97
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	291	0.99