YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49652875
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWLFGGKTE EQKKESELKN SLGFDPSQVS DVSSILQAPG VLDSTRLHPL AGLEKGVEYL  60
   61 DLEEEQLNDI EGAKGLIPSR SWTDDLCYGT GAVYLLGLGI GGTYGFQEGI NNLPKNASSK 120
  121 LQLNTVLNHI TKRGPFLGNS AGVLALTYNL IDSTLDAVRG KHDDINSIVA GGLAGALFRS 180
  181 SAGIRPMGYS TALMAGAAGA WCGIKRFLA

Type	Start	End	Confidence
Cytoplasmic	1	85	0.76
Transmembrane Helix	86	106	0.53
Non-Cytoplasmic	107	186	0.69
Transmembrane Helix	187	204	0.81
Cytoplasmic	205	209	0.50