YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VMA21_DEBHA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPADIPKSVV QKLVFFTAAM IICPVATFFI CQYLFSNNAI ISGGVSALVA NIVLIGYVVA  60
   61 AFMEDTTEQE PEETKKSR

Type	Start	End	Confidence
Cytoplasmic	1	12	0.84
Transmembrane Helix	13	33	0.93
Non-Cytoplasmic	34	39	0.73
Transmembrane Helix	40	61	0.92
Cytoplasmic	62	78	0.89