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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50406584, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.87
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFKSLISSA LLATSALVPS AVAEDLPEIE VVGNKFFYSN NGSQFFMKGV AYQQNTANSS  60
   61 DVSFVDPLAD AEACKRDIPY LEELQTNVIR VYALNVSLDH TECMSLLQDA GIYVIADLSQ 120
  121 PDESINRKSP EWNLELFDRY TGVVDLFQNY TNVLGFFAGN EVTNDKTNTD ASAYVKAAVR 180
  181 DTKAYIKAQN YRTIPVGYSA NDDSDIRDSL ADYFACGSEE ERADFFGINM YEWCGSSSFK 240
  241 KSGYESITKQ YKNLGIPIFF SEYGCNEVSP RKFEEVGTIY GDDMTDVWSG GIVYMYFQEE 300
  301 NDYGLVSVSG SSVSTLKDFS YLKAELASIS PSAAQSSSVG SASVTSCPTS TSNWSAATKL 360
  361 PPTPDKEACD CMAKSLTCVV DSDVSSDDYE DLFDYVCSKV DCDGINGNGT TGDYGAYSPC 420
  421 SDKQKLNFVL NLYYEENGSA KSDCDFLGSA TTQKANTASS CSAYLKSAGS SGVGTISGSI 480
  481 QTTKHTGITK TGSSSKSTSG SGSGSGSGSS SSSSSTNTGS SSGSHQISLG LATKSLLVGA 540
  541 VSIFGFGLIF A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle