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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23025755
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTFFLIVFS SQPSDDVSSS DETSNQPSPA FRRRRARKKT VSASESEDRL VAEQETEPSK  60
   61 ELSKRQFSSG LNKCVILALV IAISMGFGHF YGTIQIQKRQ QLVRKIHEDE LNDMKDYLSQ 120
  121 CQQEQESFID YKSLKENLAR CWTLTEAEKM SFETQKTNLA TENQYLRVSL EKEEKALSSL 180
  181 QEELNKLREQ IRILEDKGTS TELVKENQKL KQHLEEEKQK KHSFLSQRET LLTEAKMLKR 240
  241 ELERERLVTT ALRGELQQLS GSQLHGKSDS PNVYTEKKEI AILRERLTEL ELKLTFEQQR 300
  301 SDLWERLYVE AKDQNGKQGT DGKKKGGRGS HRAKNKSKET FLGSVKETFD AMKNSTKEFV 360
  361 RHHKEKIKQA KEAVKENLKK FSDSVKSTFR HFKDTTKNIF DEKGNKRFGA TKEAAEKPRT 420
  421 VFSDYLHPQY KAPTENHHNR GPTMQNDGRK EKPVHFKEFR KNTNSKKCSP GHDCRENSHS 480
  481 FREACSGVFD CAQQESMSLF NIVVNPIRMD EFRQIIQRYM LKELDTFCHW NELDQFINKF 540
  541 FLNGVFIHDQ KLFTDFVNDV KDYLRNMKEY EVDNDGVFEK LDEYIYRHFF GHTFSPPYGP 600
  601 RSVYIKPCHY SSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle