YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50355729, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVATLSSRS RRACAEAASV LLVLLVIAPS VAAGGDTNGV YEPCADAAVQ RGDGFTFGVA  60
   61 FAARGDFFSG GVQLSPCDGR LSLASKGAKL AVFRPEVDEI SLLTVNTSAA GGFDPATSGG 120
  121 YMVAFAGRKY AARSPPVFVS NSSYTVTSFT LVFEFNKGTL QNLYWKANGC SACSGQPSFT 180
  181 CVDQNCAIST ANCTGKGGSV DCSPGIQLAF SGTDKHEAVL NSWYEVSKLR QYSLVGLFSN 240
  241 LKDSLTSQFS IFF

Type	Start	End	Confidence
Signal Peptide	1	33	0.99
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	253	0.99