YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50312559, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSILSKSFYF IAWIQIIHSG VSSYEFHQIV KHIILENPDA KTPGLPDDVK LEALCGLLFF  60
   61 ILGTFISQSK LKYLSIRGEE RIIETDEYLK PIELNKASST DVVINNDPYG EINYLPSFVD 120
  121 IHAKRKLFKE YLHRSL

Type	Start	End	Confidence
Cytoplasmic	1	7	0.49
Transmembrane Helix	8	24	0.49
Non-Cytoplasmic	25	136	0.57