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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50312299, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEDLLDPTS TTVVTYTHYA RIAAFKDLNT TTVNQVLGLP GLFSTFNAPQ LRKLRISAIS  60
   61 ASVASIFACI IGLYLLTSID RRRKVFRHHL IFYLLVCDFL KAIVLLIYPV VILRHNEIYG 120
  121 TPAFYNTVGW LTAYAIEGAD IAIFVFALHF AILIFKPNWK WRNNNTGNLE GGFFKWRKFI 180
  181 YPFTALTPTV LASLAFINFS SYNEDVIEAD TNVVLDNNNY NFEFQAKMGG YKPLSAWCYL 240
  241 PPVPIWYKLV LSWVPRYFIF LTICTIYISI YVFVNRESRK IKSEIKGFQH SEDNHVNFFN 300
  301 RKPSLNIALN VINGSAIGIK YCFKRFVSFL RNFFFLELFD DTESQKHNLS AAGGRQRAGT 360
  361 PGLPSVNDLD IGLSNRYEYS PDEVDIEDGY NNNSNNGLHL FEYSNLPIAS HDGSEDLNKN 420
  421 RKPDSLTPAK PQVAQFRQPA NSYASARCPP SIPLQTSSSP NDVPNVSKHS TNTVDNQAMG 480
  481 TEVDIEKMEH LPGKDVTGIK HKFQSEMYAH FKNRRDQIRR QLKSIFVYPM AYLLLWLFPF 540
  541 IVDCSQYSYE IYNGPIVWLA YIATFMQPLN GVVDVAVFLY REQPWRYSWG LIHFKELISK 600
  601 YRLKGEIGEA DILSMCESEL GRRGWYYRGR WVKEECWKYK PQLWKRTYWY VHRTVIGLWR 660
  661 LDLNFEDNCL DRDYWDSYYG NHASNTMSMS TTNKLKLFPV LHQSLSSSTG SSENGIDPYK 720
  721 RKFKVPLMWR IFHKLPLQEG IDLDELDRYL KMKNRYDDFI IPGLQFAIDQ NTSNNNNSLF 780
  781 KPNYLLSSSS KEKEPTSDIS PSKHSSITET PLQGSLNFGN VANMNFADVT KNANLPGVCA 840
  841 NSNQSQSSTK EEQLDLLSFL KGPPPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle