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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50312119, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKFGEHLKR SLIREYSYYY ISYNDLKTEL QESLEANNGK WNEDLETQFL ESLEIELDKV  60
   61 YTFCKVKHNE VVRRIKQAQE QVSVAVRSLD TNVPVTDLDF QILEEELSDI IADVHDLAKF 120
  121 ARLNYTGLQK IIKKHDKNTN FILKPIFQVR MDAKPFFKEN YDELVVKLSQ LYDIVRTRGN 180
  181 PVKGDSAAGG KQQNFVRQTT KYWVHPDNIT ELKLIILKHL PVLVFNTNKE FEKEDSAITS 240
  241 IYYDNEDLDL YYGRLRKDEG AEAHRLRWYG GMSSDTIFVE RKTHREDWTG EKSVKARFAL 300
  301 KEKYVNDFLH GKYTVEQAFA KMRREGKKSI QEIENLEALA TETQYTMLKK KLRPVARSFY 360
  361 NRTAFQLPGD ARVRISLDTE LSMVREDNFD GHDRTNGNWR RMDIGVDWPF NQLPEKDICR 420
  421 FPYAVLEVKL QTQMGQEPPE WVRELVGSHL VEPVPKFSKF IHGVASLLND RVSSIPFWLP 480
  481 QMDVDIRKPA IPTHINITRP GRDDEDEYED TEDEELAAPG NSYDIEEAAG EAGTAPAGQS 540
  541 STGNYGSITQ DSARAGNTAD SPAASENSAA LLRNIRQASN PVAKYWHTLV YQIDHYLYGD 600
  601 QVSKVPEGTV FDTYVHAPPG KTICVPVRVE PKVYFATERT LLSWISIGLV LGGVSTSFLT 660
  661 YGTPTTMVAS TGFFLTALFT IWFSTYTYCK RVVNIRMKRS IDYEDKYGPR MICAFLMASI 720
  721 LFTFFCNLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle