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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50311731, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTVNMRPSL ASISGVGPSG PTTATATSSR SFKPCANCTC SYGQLSRQGR RSSALLKQIN  60
   61 FSRRHSHFGN PPLSPTSESI YSTDSICQLK STETAKRLLA LRKQMDTHDL CCYIIPSEDE 120
  121 HQSEYVSQAD ERRAFISGFT GSAGVACVTR DLLNFNTDKP EGEAILSTDG RYFNQASQEL 180
  181 DCNWTLVRQG EDPITWQQWA VNEAHEMSLA LGGKPTKIGI DPRLISFDQV RMFEKVIKDK 240
  241 TEGTNAKIEF VAVADNLVDK IWCEFETMPV RDLNELLLLD RKYTGECYKS KRERVMNKIS 300
  301 KDHNGASHLV VFALDEICWL LNLRGSDIEY NPVFFAYLVL SNDETILFTD NPFDDKIENY 360
  361 LSENNIKVES YQNIWSFLSD KASALAEKKE TILIPSNSSW EIVRKLYGST MKRVSSPIEV 420
  421 MKSVKNETEI QNAHSAQVKD AVALIQYFSW LEDQLVKHEK LIDEHKASQK LTEIRKTAKH 480
  481 YMGNSFCTIS STGSNAAVIH YEPPEENSSM IDPNKIYLCD SGAQFLEGTT DITRTLHFTE 540
  541 PTQEEIDNYT LVLKGNLALE RLVVPEGTSG YNIDVIARQF LWQAGLDYKH GTGHGVGSFL 600
  601 NVHEGPIGIG YKPHLVNFPL EKGNIITNEP GYYKDGEYGI RIENDLLVKE AEGLQFGKRK 660
  661 FLKFENLTMV PYCKKLINTS LLTPEEKSQI NDYHTRIWSS IVPFLQPSSI AFKWLKRETK 720
  721 SL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle