YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49645005
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNFVVALWE SIFQPGTSPQ LIIATHISFA LLLCVLGSQI YLTKNIHFIA LTIIATLLWI  60
   61 TVTWFIYELQ NTKLVTNEDL QTAESKKTDK TEPSKPSEEI NLEGVAKPDP KPSSTPKKRK 120
  121 TKSRRA

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.56
Transmembrane Helix	21	41	0.91
Cytoplasmic	42	45	0.54
Transmembrane Helix	46	67	0.92
Non-Cytoplasmic	68	126	0.62