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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49644868
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGTQILDK SVPEWKLHNI DYQQLKVGIR RCTTVREGQD PEFRPNSIED DPELRSLKKL  60
   61 FRSQFEMINV FISMKLKECS TRIVSIENYL TQLHLIKDEN KKLRRIKLIN QHLDRCNLEL 120
  121 QKLSRYLILQ KIAVRKLFKK FLKHYPYGTQ LAQEFINSLK NCPEFKEGHE GVSMLTVDLD 180
  181 PYLLEISLIV DLLHEMEQDA DQQPVDSGNT KTGNTSNSRA NSNVGITSGT APSSRKSSVV 240
  241 SSSHVIDSTL KFDHYFLSKF NPLGSFLISK ESEDEIKFLL INLGFCLFDD SVIATSKKIL 300
  301 SGDALLSKRK GSIKSLRMFR DAQREEAASS SQRRDTESSP PVGSPESDPG SNRSQQLSNS 360
  361 SSSAHNILFE PLAKPGADVT NLYNSTEENL FPNLLVSYPS SNDSILLCHV GGLRNHISTD 420
  421 TIEYTDIKAV LNGCEPSLMP VSNRLDEFCR DWCYSHNLKT TDLVIKCRRS RFIISHSSIE 480
  481 TNNDYLICID DNIEINDNKL PFAVLEVKIL EATSSSSVPN KTYSKKHIDP IMVDLTEKLV 540
  541 TDNLSVYPTG RNFTLWEMAG KIAGGSNPLA CLDGNLNFES VEEMFGAGNA LLKKTHDRYQ 600
  601 SLLNPPTIEF SQSSSQNTAV NISPTVTERE KPRIRYWNEF DDGEEAMDQD FYSCLDEDDD 660
  661 EYTHDTGLIR FNPSFIIAIY HLLSKFQIAF GIIDDVQARK SLLRDAGKSY NSIDTDTSIL 720
  721 TSSSSERNDV NKFWELEEQN SESIYEFEHD QVISFFYVSS LLISCLTTGV TIGIMTSLFK 780
  781 SLNDDTQLEN ETSILTMIFI SLSISLILGA WSLLLMFSRF TFAPTWHYIT GVVIFIIIIF 840
  841 AVCYGFIELI L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle