YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49644583
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRTAARNLG VPLRRSVYVG FSGSLLVGGG SLLHSMQPSS YIMNDSIVDV KQRTNLPQEL  60
   61 GLPSRVDISS KQRRVNYRQM CYGSILGLVF GVIFGKISSL LVFITGVGFV GLQFLQNRGV 120
  121 ISSDSTRSLS KYVVTIGRER IDLNTLIWDK PSFKVSFILT FVLAALNV

Type	Start	End	Confidence
Cytoplasmic	1	15	0.91
Transmembrane Helix	16	36	0.90
Non-Cytoplasmic	37	91	0.89
Transmembrane Helix	92	112	0.90
Cytoplasmic	113	168	0.86