YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49644416
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFTTALASA SFISAAMVSA LPHAHAKRDE DCSTTVHAHH KHKRAVAVEY VYQTVTVNGQ  60
   61 GETIAPATVT STEEAATTSS TEDQQTTTLE PSTSSSEEES SSSSSSSSSQ SSTESSTEAS 120
  121 ESSTSSQSSS SSSSGSTSTS TSSSGDLSWF SSPTEEFEDG VMSCDEFPSG QGVVYLDWLG 180
  181 FGGWSGIENS DGSTGGTCKE GSYCSYACQP GMSKTQYPSD QPSNGVSIGG LLCKNGKLYR 240
  241 SNTDEKYLCT WGIDSAYVVN ELSDVVSICR TDYPGTENMV IPTIVNGGSK LPLTVVDQDT 300
  301 YYTWQGMKTS AQYYVNNAGV SKEDGCVWGT SGSGIGNWAP LNFGAGATGG ISYLSLIPNP 360
  361 NNREAANFNV KIVAADGGSV IGECVYENGS YNGGSDGCTV SVTSGAANFV LYD

Type	Start	End	Confidence
Signal Peptide	1	26	0.98
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	413	0.99