YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49644180
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPPKVYGQ QQQPSNWEKF KMGLMMGTTV GVCTGILFGG VAIVTQGPGP NGFVRTLGQY  60
   61 IAGSAATFGL FMSIGSVIRS DGTSDNSHNN GFYHSKMAEL QQRSRFEVWK AKQTYGLYKD 120
  121

Type	Start	End	Confidence
Cytoplasmic	1	22	0.92
Transmembrane Helix	23	44	0.93
Non-Cytoplasmic	45	56	0.80
Transmembrane Helix	57	78	0.88
Cytoplasmic	79	120	0.94