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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50309621, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTFISNLK SAPNGLLSKV LLVGIFVNAW YFYYLTFNSS KSTGISFKYG DSFSEAPGAE  60
   61 ISVSNFRDFV RPLDRDNSSA IFNTINDALK QRNSDIHSVG VSFIPAVIPQ GTLLYHAGVS 120
  121 EIPDSFEWVA FDYEFSLNFG TRRQSRGRAS GNRNSNGHGP GGGPGGGPGG AKPGGGPGGG 180
  181 PGGAKPGAVK RAETEEEKKD QNKRFSQTAS LLTFQATRDL NKVIIFDGGS AAKSTSGEID 240
  241 TQQLWSNVIA KQSGDTTNDT EYHMPERLYA SRICEWGKPL GLDGFIRVEL AFEMVICDFS 300
  301 RGLELVSNTT ILSNSDFVGL PPAVSLTKEN GWPIGDDGKI IEDQLTDEQK KVLDQEDVYD 360
  361 KYLGELGAGG TYDHSKAGQF RDEGERRARI DFRYMITGIN RTWLNPNPNA RRLISDTVPF 420
  421 SLHEEIVEDL KQVLSSDTGF DWRQSTDWQN VARDIIGKFT PMLLSVHDTL KSGTGTAAER 480
  481 ARKASLYYTN FVRRFQDTDQ SFEKSKEFAV YQYATPMVPL RTDSDFLIWS AFVNVMTDVI 540
  541 DVIFGAEKSL QSVINASLEG STPADIDNVV NDVIASIHEL IVNLKWVELS YRCAENCGYD 600
  601 GFCYTPSWGP SAFGWMNPNV KNNPETGLRW DDSINRYVVD EKQQCVNLDT ILNFKRQA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle