YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49643472, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGTELSDIY QWSQTPYLAW LNGAMLITTP VVSPATQTPV SVMAQKQSMF SAFTRPRYFG  60
   61 PTKTLSLMFG LANAIGGFMI YDGDLESGTG FLAAWNSLYL LVGGRGSVKA LRYGKVWPLL 120
  121 LTTVSASSAA LYGRKVCCIG IPIDGIRHIK KRTMTLFFLR MRIF

Type	Start	End	Confidence
Non-Cytoplasmic	1	17	0.77
Transmembrane Helix	18	40	0.74
Cytoplasmic	41	58	0.91
Transmembrane Helix	59	81	0.87
Non-Cytoplasmic	82	88	0.80
Transmembrane Helix	89	108	0.73
Cytoplasmic	109	164	0.71