YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49643139
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFFSKIVFW GKSVIAVTLL SSCALYGVLA SIVFSLIGKK HLAQWSTARC FYGVMGFIMG  60
   61 IKINLINGER LNDLPAIFIS NHQSELDILM LGRTFPPGCT VTAKKQIKWV PLLGWFMSLS 120
  121 GTLFLDRSSR EKAIKVLNDS LANLKKDKRA LWIFPEGTRS YSTKLELSAF KKGAFHLAQQ 180
  181 GKIQIIPVVV SNTSSIYHPR SGVFNRGTIT VKVLEPISTE NLKKEDVGDL CNRVHKLMND 240
  241 ELKNIGYSEA IVDTVLPADV IAYNSARRFE DQHRLTADDY EEEIVDLDRS SIHSNGTVVT 300
  301 NPEPTERSSL LKEVI

Type	Start	End	Confidence
Signal Peptide	1	30	0.50
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	315	0.75