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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50307833, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLQGSYGT KSFLSMTGLK ASQSEQDIST SHSRINLSQM KLNKLLEGKK WENLESFGLE  60
   61 ELRNGFFDPV YTGYERLQPT DPTDVDHFDE TRKPLFPHID PKGTRKYWKH IVKYWIAIFV 120
  121 ANILCLIRPA GNWFGGEYRY FLPLAVLIHH PSRTVGVQLE LSLQSILGAA IGMGYSSLIW 180
  181 FVSTATKPAA TNAGGILFLG LFLAAIFTHW LRTTYQRLFY FSTSFGIAAL FFCGSSLVFN 240
  241 KSDLDWKLYW DFGISYLFGI LLALLVCCTV FPHTCHFTAK VTLISTLEEM KSFLCNVIDP 300
  301 KHCEDVTSLR ETQNKMSEAV NIYLSEGLRE FSNQTTFTVF DDECLKELRN VITFTASPLR 360
  361 VLPTNNGLLT KAELEQFFKD GTNTEVPSSQ AKSANSPMIF SGMQTPQASS GIPNLGIDFN 420
  421 TAIYNNILRS FFAKPIYQLI REMLLVIESI QSYIELYSNF SVNKSEVEQS MRKLQKLQKK 480
  481 LRRKIYRLDV AYKDFTKTNF FCKDLLQDPN STDAFLFLRY VRQSAKSMIA VAERTIDLAK 540
  541 NLKWRICLPN YPLQRSLTRL PRQCALDQGA NAVLHYFETK RDVDKAFENI YNSYTSRHKY 600
  601 NDVKGKKLEA YTRAIDHNDF NFHTTTNPIR YKIWQLTTKI TGVENKSALK VAFMLTFLLL 660
  661 PSWLKQSYTW YQYYHCWWGA TIFFILTNSR NVATWKGILR RFMYGFFGIV WAFCACVSRR 720
  721 NNPFVIATFG GILFAPLAVD FFVNKNTKSS LTASTCFIII TLGIYGKADK LPMGTSDIWK 780
  781 NTWTTGVSLL IGVLLSIPTT WVLWSFKTRR ELRLAMSSLL SHISQSYQSV TDRYLYRDID 840
  841 DDPTDLSLRL SNIREVRLYQ SIYAAASLLD RAKQEPNYIS NFKPHLYEEL INRCRLLLEK 900
  901 VIEARISGQY FQVWENDADE DITHALLSLR RDSVSSVIFV FYILSNCFRS KNKIPKYLPN 960
  961 PILSRKKLYD FINKFENMRQ LRQRNAPVLP RKPLLKSDID ISKDIEKTHW TEVHGMAFAR1020
 1021 AYTDFTLHLD RVIKLAREIL GEEAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle