YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50307813, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKQECGSWT NCPISWAVFL VFSGFLPTIT ALQPKSTIAS VCTLHIVPAP PVTNTTLPWN  60
   61 VSFFHGPFST KVLSKVLGIL SYTVSAYLYA QFLSQFIEVM KYMSLKSRKC

Type	Start	End	Confidence
Cytoplasmic	1	11	0.65
Transmembrane Helix	12	31	0.86
Non-Cytoplasmic	32	71	0.69
Transmembrane Helix	72	93	0.69
Cytoplasmic	94	110	0.59