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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49642942|emb|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALMAHLRFS LVVPFRLVGV TRHLHCTARA LAQEGSENEI SLLLSKHGKK LKPKQDHFLV  60
   61 LTPHQTGVMR LPRKSKTLQS NSHLSILEGF DFKRHTENGT NHSQVRDVDI LSNIQDTTSK 120
  121 LMKFKEQEDN EQMAKAIDSC KPSSEAISEK RYLQLEKVLD EQFTLQQLRN YCYLKHGVRK 180
  181 ARIPKKNLIP TIITKLWNCS IDYNKSEHDD LIVENEISLE TRDIYLLLLT KNGRILQNLA 240
  241 RIGATIAVVI DENKLVVRAT SHIFKYVEVS ISRILENVVS DDFSIEEFIK DHSQIDGVHH 300
  301 MTPEEIIALM QTQSSSYVEI TDDSKYKIST IGRKNMNIIN SLLLWVLNYN PQTTEILVPY 360
  361 DGGEKTEQYP LTNYEWINWV ARKQSWHRIQ QPVAINQEIK DTKIDLSEKI DKIWDILEIN 420
  421 KTKCAKPLAF TETKSLSIAF GHILENAQNK ILFQSKIPEV VPKVLRLPLW DKDGYVEDDL 480
  481 FSVDQHLYLV QMKFVPNLAD VSHKVNVSPL EVWFTLDENN NADTSTVRCI HTYSDNSACI 540
  541 QTPTLSHDFK ITVTDTVDAL PEDLESSEFF DWLQREQPSF RKFLQESNFS FGGLKKPRIA 600
  601 PSFELNVKLE GMEEPQKIRY NYLHRYEHRL LRFKYKEDCL VQLSEIEGGS LGGKASSIDF 660
  661 ISTNGSINKD IVRNFIDDVL QF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle