YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49642676
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLSSVNVT YFRIVFLLGL AYLSVTDVNA ILGNSLVLVL TQAMDLPALQ IPQQSAQLGL  60
   61 FSLLLGLSAV HDLLPLLENN KKHFQAVVPF RLMIFFVLTA LSVFMNNNLY LHNNAIFVYG 120
  121 FCEVWMNFLI FVALRDERND DFATGNGFYR PMDVIDEDPF PSTERDIQEM EDDEN

Type	Start	End	Confidence
Cytoplasmic	1	8	0.96
Transmembrane Helix	9	33	0.80
Non-Cytoplasmic	34	54	0.83
Transmembrane Helix	55	75	0.90
Cytoplasmic	76	86	0.84
Transmembrane Helix	87	105	0.95
Non-Cytoplasmic	106	114	0.72
Transmembrane Helix	115	134	0.90
Cytoplasmic	135	175	0.95