YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIM22_KLULA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYRGFGLDQ VSPPENKPFD QLSPEEQGEK GAQMMVEFMT SCPGKAAISG VTGFALGGVF  60
   61 GLFMASMAYD TPLHTPAPTN APGLPNKVKE LADLPLKQQI KIQFSDMGKR SYSSAKNFGY 120
  121 IGMIYSGVEC VVESLRAKND IYNGVAAGCL TGGGLAYKSG PQAALVGCAG FAAFSTAIDL 180
  181 YMRNENKKPP KDDFDE

Type	Start	End	Confidence
Cytoplasmic	1	45	0.92
Transmembrane Helix	46	68	0.87
Non-Cytoplasmic	69	161	0.92
Transmembrane Helix	162	181	0.85
Cytoplasmic	182	196	0.87