YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50306911, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLTYKDFCA VGTALIIGST TFLMGIFFSN QPYDYNILFN PAATPEHFEN ALKHYQTLFY  60
   61 TAKPTLYMLG AVAIVGVIGS LIRVYKPNPD LQLFEYGSLA LYVLGICVFL TNIKTGVESA 120
  121 VYHNWGEVSE AQGIAVVASS NIIILIVFAG VLVLQGGLWY STWEYEQRLD QWRKDQLKES 180
  181 AANQQKAEKT TEPAKTESKK KK

Type	Start	End	Confidence
Cytoplasmic	1	7	0.96
Transmembrane Helix	8	29	0.94
Non-Cytoplasmic	30	64	0.95
Transmembrane Helix	65	85	0.93
Cytoplasmic	86	92	0.93
Transmembrane Helix	93	115	0.86
Non-Cytoplasmic	116	133	0.89
Transmembrane Helix	134	159	0.82
Cytoplasmic	160	202	0.95