YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50306905, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFILTISFSV IAPPSSFSFV FATINLIISS FTVSKAIFPT QTPNFFSLLG LEVIFSSSTL  60
   61 VSSDEPSFLL DVSSLSCFSA VSFLYSSIDF ESMLYLAFNS SIVTLPLLNK RFCFLDKGTD 120
  121 WFKSISISSS AFLFLVGSFK T

Type	Start	End	Confidence
Cytoplasmic	1	9	0.47
Transmembrane Helix	10	38	0.64
Non-Cytoplasmic	39	92	0.44
Transmembrane Helix	93	109	0.53
Cytoplasmic	110	120	0.55
Transmembrane Helix	121	139	0.59
Non-Cytoplasmic	140	141	0.62