YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14042842
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGILASGLG VLAHLERLET QVSRSRKRSE ELQSVQAQEG ALGTKIHKLR RLRDELRAVV  60
   61 RHRRASVKAC IANVEPNQTV EINEQEALEE KLENVKAILQ AYHFTGLSGK LTSRGVCVCI 120
  121 STAFEGNLLD SYFVDLVIQK PLRIHHHSVP VFIPLEEIAA KYLQTNIQHF LFSLCEYLNA 180
  181 YSGRKYQADR LQSDFAALLT GPLQRNPLCN LLSFTYKLDP GGQSFPFCVR LLYKDLTATL 240
  241 PTDVTVTCQG VEVLSTSWEE QRVSHETLFC TKPLHQVFAS FTRKGEKLDM SLVS

Type	Start	End	Confidence
Signal Peptide	1	15	0.59
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	294	0.99