YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49641187
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEVFNDIP EELHATILSR GDSLNVMNSH DLEQDTDDLR EENRQYLTNL ADTGVSVSRS  60
   61 PSTTSTTSLS QLSSEKNGVS FGKILSFAGS CSINLVLPFI NGLMLGFGEL VAHELSWNWN 120
  121 WFNRKNTGYR IFPESRKKFE YDITETHPSN SGKTVNDTES NDKFL

Type	Start	End	Confidence
Cytoplasmic	1	83	0.67
Transmembrane Helix	84	107	0.57
Non-Cytoplasmic	108	165	0.89