YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50304009, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAQISNLVI MLIMMQVSRR LDMEDPSIVL YIRIAYVASV AITWSIYQYA RAQIVKKNDL  60
   61 ATLKYVAPAN PLGGQTEKKL EVTTVRDYDL QQIDSAIKSI YTGLAMMGFM HLYMKYTNPL 120
  121 FMQTISPIKS ALEHNEVQIH LFGKPASGDL KRPFKTPSLF GGAGGASEPK TDKKSIETAE 180
  181 KAGNGGVKAE

Type	Start	End	Confidence
Cytoplasmic	1	28	0.45
Transmembrane Helix	29	47	0.55
Non-Cytoplasmic	48	190	0.72