YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50305177, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPLLQKAP GKRIALPTRV EPKVFFANER TFLSWLNFTV MLGGLGVGLL NFGDKVGRIS  60
   61 AGLFTLVAMG TMIYALVTYH WRAAAIRRRG SGPYDDRFGP TLLCFFLLVA VIVNFFLKLK 120
  121 YQGDTQQSD

Type	Start	End	Confidence
Cytoplasmic	1	31	0.94
Transmembrane Helix	32	52	0.93
Non-Cytoplasmic	53	58	0.81
Transmembrane Helix	59	81	0.90
Cytoplasmic	82	97	0.90
Transmembrane Helix	98	117	0.94
Non-Cytoplasmic	118	129	0.84