YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21754713
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLSRGSAR ALLAALLAST LLALLVSPAR GRGGRDHGDW DEASRLPPLP PRFVTHVSDW  60
   61 GALATISTLE AVRGRPFADV LSLSDGPPGA GSGVPYFYLS PLQLSVSNLQ ENPYATLTMT 120
  121 LAQTNFCKKH GFDPQSPLCV HIMLSGTVTK VNETEMDIAK HSLFIRHPEM KTWPSSHNWF 180
  181 FAKLNITNIW VLDYFGGPKI VTPEEYYNVT VQ

Type	Start	End	Confidence
Signal Peptide	1	31	0.99
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	212	0.99