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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49641483
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSHSLKYN AVPEWQDYYI DYSHLKKLIY SLQQQELDQL NGGSDNKAGS SSKSNKLSSL  60
   61 KFWKKNGLED DSDTGIVSGS GFGKNSGGDD DANVETIELG EYPNTKKSSK RSKFGFDFDK 120
  121 RSSVSSERTI FNSQDVFLAK LTDEKRKIDD FYKRLEAKLY SKFETLTKDL ENAGFANLPN 180
  181 HLYNEAFEAQ SLSGVATRVK SNETVFSGIS RRLSVHSQRD HGDEEDSAID EEEEEDDDDH 240
  241 VQDNTALLNY ADYNLKSQKR SILKKNVIDL YVDLAQLKSF IELNRIGFSK ISKKFDKVLS 300
  301 CSIKRDLIES GEFFHDAHIF LPDTITELDN KISHLISYYA VITDQEDDLQ TVKDELRSYL 360
  361 RDFIVWERNT VWKDLLGLES QQNDFTSVGR PAVNGEISAL ENITHLEYYS YTLPKPINIK 420
  421 FTTIEKLSIP KLFFTMKALK IYVIIIFTII LLAVRTFHDE AQHRCMALVE CVALLWATEA 480
  481 IPLFVTAMLV PLLVVLFRVL KTDAGQVLNA VDASSLILSK MWSSTIMVLL AGFTLAAALS 540
  541 KYNIAKVLAS YLLTAAGVKP RNVLIVVMGV VFFLSMWISN VAAPVLTYSL IQTVLRTLDS 600
  601 EAPFAKALVL GVALSANVGG MASPISSPQN VIAMDYLKAY DIGWGNFFAV AIPVSIVAVF 660
  661 LIWILLILTF KINTSTLKPY KPIKEQFTLK QYYIIAVTLA TILLWCVLSK IESAFGSAGQ 720
  721 IAVIPIVLFF GTGLLTTHDI NNFPWSIVIL AMGGIALGAA VSSSGLLGTI AGSLQKRVMD 780
  781 YPTYAILCIF GIVMLVVGTF VSHTVSAIII IPLVQEIGDK LPSGNAAPIL VFGCTLLASC 840
  841 GMGLASSGFP NVTAISMTDE VGNRYLTVNN FITRGVPASL LAFIVVITIG YGIMSSVLHG 900
  901 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle