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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BGA17_ARATH
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMTSWPSTG RQRRHQLASM LLLVLVVVGI YVPVFALLPS LSYTPQSLPS AIPQDEKMIS  60
   61 RKFYIKDDNF WKDGNRFQII GGDLHYFRVL PEYWEDRLLR ANALGLNTIQ VYVPWNLHEP 120
  121 KPGKMVFEGI GDLVSFLKLC EKLDFLVMLR AGPYICGEWD LGGFPAWLLA VKPRLQLRTS 180
  181 DPVYLKLVER WWDVLLPKVF PLLYSNGGPV IMVQIENEYG SYGNDKAYLR KLVSMARGHL 240
  241 GDDIIVYTTD GGTKETLDKG TVPVADVYSA VDFSTGDDPW PIFKLQKKFN APGRSPPLSS 300
  301 EFYTGWLTHW GEKITKTDAE FTAASLEKIL SRNGSAVLYM VHGGTNFGFY NGANTGSEES 360
  361 DYKPDLTSYD YDAPIKESGD IDNPKFQALQ RVIKKYNASP HPISPSNKQR KAYGSIKMQM 420
  421 TTSLFDLVRM TDPADVITSA NPISMESVGQ MFGFLLYESS YIAKKSGNTL RIPKVHDRAQ 480
  481 VFVSCLSQDV DVGVLRYIGT TERWNNQPIS LPTIECTTNT SLFILVENMG RVNYGPYIFD 540
  541 DKGILSSVYL DGQILHGWKM IPIPFHNLNQ EPNLTFEMQH TKNRSKKFEL TNDVGRKEPA 600
  601 LFAGEFSINS EEEIKDTYLS FNGWGKGVAF VNEFNIGRYW PSVGPQCNLY VPAPLLKRGK 660
  661 NTLVVFELES PHLELSLEAV DHQDFTCGSN VSKVNQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle