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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ALMT5_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGKMGSVPE QNTEKLLWQS SDVADSRDSK FRCCSWRALY EAPAKLYALG HSDRRKLYFS  60
   61 IKMGIALALC SFVIFLKEPL QDASKFAVWA ILTVVLIFEY YVGATLVKGF NRALGTMLAG 120
  121 GLALGVAQLS VLAGEFEEVI IVICIFLAGF GASYLKLYAS MKPYEYAFRV FKLTYCIVLV 180
  181 SGNNSRDFLS TAYYRILLIG LGATICLLVN VFLFPIWAGE DLHKLVAKNF KNVANSLEGC 240
  241 VNGYLQCVEY ERIPSKILTY QASDDPLYSG YRSAVQSTSQ EDSLLDFAIW EPPHGPYKTF 300
  301 NHPWKNYVKL SGAVRHCAFT VMAMHGCILS EIQASPEKRH VFSNELRRVG NEGAKVLRLF 360
  361 GEKVEKMEKL SLSLGEILKD VQRAAEALQM KIDSKSYLLV NSESWAAIKE QAEAEEAREN 420
  421 DQEAKDDETK VIKSLSQIWD TNNNNNHQSN DQSQHWMSTE SMMLKNREMW PSMSFIDGTV 480
  481 VNEIECKVYE SASSLSLATF ASLLIEFVAR LQNIVNAFEE LSTKAGFKDA VDQIPKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle