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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50304405, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRKGESAK KRLVSGTAAS LQELSLKPNS NGIQSSGKTE DTDVPGDSIS GEFGAALSDS  60
   61 NVENSVKAFN LIFTKLKSTS EMERTAASFE LRSSLISLAR EVSTEHFQRF SNDINNKVFE 120
  121 LIHGNDSNEK LGGVLAVDTL IDFYSRTDEL PNQTSRLANY LRVLIPSNDI EVMRAAAGTL 180
  181 GKLAVPGGTL TSEFVEFEVK TCIEWLTTSP ENSSSNSKQE YRKHASLLII SAIADNSPYL 240
  241 LYPFVNSILD NIWRALRDTK LVIRTDASVT LGKCLTIINN RDSSLTKKWV QRLFNGCIYG 300
  301 LQLNSTVSIH GTLLVYRQLV SLEGGYLKDK FEEIYETTMR YRENKNIIIR KEIYAIIPVL 360
  361 AAFDPKLFTQ KYLDSTMIHY LTLLKNMNSH PVTNSDKGPI LISVGDIAYY VGPDIGPYLD 420
  421 AIVENLRDGL TTKYKFRKDY EQEIFYCIGK LACAVRPLLA KYLNRGLLEY MLACPLSDHM 480
  481 QETLLIVCEK IPSLEGTINE KLLNIICLVL SGEKFRPPGS PTPMKPFSAE TARNYRDQSL 540
  541 FKKTGEANND IFDAVILTKA LRMLSDIKPK YSLTEFIRRV IISYMEHDNL QVRKLAALTS 600
  601 CDLFVEDSIC KQTSLYALNV VSEVLSKLLT VAITDPVAEI RLEILRHLDT NFDPQLSQPD 660
  661 NTKLLFMALN DEVFAIQMEA MRICGRLALV NPAYVIPSLR KTLIQLLTEL KHSKLTRKKE 720
  721 ECASLLCTLI SSSSDVTKPY LEPVIEILLP KSQDSSSAVA STALKAIGEL SVVGGEDMVP 780
  781 FLDELMPLII DTFQDQSNSF KRNAALKALG QLSASSGYVI DPLLDYPELL GVLLNILKSE 840
  841 SSQNIRRETV RLIGILGALD PYKHREVERT SSTNITVEQN APPIDVALLM QGMSPSNEEY 900
  901 YPTVVIGVLM KILKDPSLSI HHSTVIQAIM HIFQTMGLRC VIFLKQIIPG FILVMHTCPP 960
  961 SLLELYFQQL SVLISIVKQH IRLHVSEIVE VISEFFPIVK LQLTIISVIE SLSRALEGEF1020
 1021 NPYLPNILSL FLDVLEKDQS NKKVVSIRIL KSLVVFGPHL EEYAHLVLPT IIKLSEFSSG1080
 1081 NLKKAAIITI GRLSKNVNPL EMSSRIVQAL VRVLNTSELE YVKATMNTLS LLLLQLNIDF1140
 1141 TVFIPVINKT LVKQNIQHTI YDRLVAKLLN NEPLPTKIII DKDFDLPNKE MDDVKVASKK1200
 1201 LPVNQLVLKN AWDCSQQRTK EDWQEWIRRL SISLLKESSS HALRACSGLA GIYYPLAREL1260
 1261 FNASFASCWG ELYTQYQEDL VQSLCSALSS PNNPPEIHQT LLNLVEFMEH DDKPLPISIS1320
 1321 TLGEYAQRCH AYAKALHYKE LEFIEEPTTS TIESLISINN QLHQTDAAIG ILKHAQQHHD1380
 1381 LQLKETWYEK LQRWDDALTA YNKREAAGED SIEVTIGKMR SLHALGDWDQ LSELAADKWA1440
 1441 SSKIDIKRAI APLAAGAAWG LAQWDRIEQY IEVMKPQSPD KAFFAAVLCL HRNNFDKAQE1500
 1501 QIFAARDLLV TEMSALVNES YNRAYGVVVR TQMVAELEEI IQYKNLPQGS DRRAMIRKTW1560
 1561 NKRLLGCQKN VDVWQRILKV RSLVIKPKQD MKVWIKFANL CRKSGRLGLA QKTLNTLLEE1620
 1621 SSDPKNPNTA RAPPPVVYAQ LKYMWATGSQ KEALNHLISF TSRMAHDLGL DPSNMIAQSV1680
 1681 PQNSSVSQHH IEDYTKLLAR CFLKQGEWRV SLQPNWRLEN PDAILGSYLL ATHFDKSWYK1740
 1741 AWHNWALANF EVTSSLTQRI KDDKVLTLED ASTEFTNGAV AGLGANENFP PELVQRHVVP1800
 1801 AIKGFFRSIA LSQSSSLQDT LRLLTLWFKF GGIPEAAQAM HEGFGLIKID NWLEVIPQLI1860
 1861 SRIHQPNQTV SRSLLSLLAD LGKAHPQALV YPLTVAIKSD SVSRQRAALS IIDKMRMHSP1920
 1921 KLVDQAELVS DELIRVAVLW HELWYEGLED ASRQFFGEHN TEKMFATLEP LHEMLKRGPE1980
 1981 TLREISFQNS FGRDLNDAHE WVMNYKRTKD INNLNQAWDI YYNVFRRISR KLPQLQTLDL2040
 2041 QHVSPKLAAA KDLELAVPGT YHAGKPVIRI THFEPIFTVI SSKQRPRRLS IKGSDGKDYQ2100
 2101 YIVKGHEDIR QDNLVMQLFG LVNTLLQNNP ESFQRHLNIQ QYPAIPLSPK SGLLGWVPNS2160
 2161 DTFHVLIREH REASKVPLNI EHRIMLQMAP DYDNLTLLQK VEVFTYALDN TKGQDLYKVL2220
 2221 WLKSRSSESW LERRTTYTRS LAVMSMVGYI LGLGDRHPSN LMLDRVTGKV VHIDFGDCFE2280
 2281 AAILREKYPE KVPFRLTRML TYAMEVSGIE GSFRITCENV MMVLRDNKES LMAILEAFAY2340
 2341 DPLINWGFDL PTQAVMEQTG IDLPLANPSE LLRKGVITVE DAAKMELQQK AEVRNARATL2400
 2401 VLKRIADKLT GNDFPRYQEL SVPDQVDKLI QQATSVENLC QHYIGWCSFW 

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