YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49641236, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDITIDEGL LRQRLEKLKE DHRASLSLQQ NSISFELLSE LYQQFWRDDA TVSMKQLLKS  60
   61 GKLRYKEKRV PGEGYSESFK AELENLKALQ QEKEYQEMLK RDSLHLAGST ADKEPSIAQI 120
  121 NKEIKEQVSA VVNVLLTVFG TIYAVWYVTR TGWDIHVRVL LCLFSGLLVL TADVAMYNVY 180
  181 NRKIEEARTT ERKKKVTRKV VKRLV

Type	Start	End	Confidence
Cytoplasmic	1	127	0.96
Transmembrane Helix	128	148	0.91
Non-Cytoplasmic	149	154	0.85
Transmembrane Helix	155	179	0.86
Cytoplasmic	180	205	0.94