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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IRX14_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSALHQSY LNRRSNSFRS PTSLDSSVDG SGKSLIAVFW LILHCLCCLI SLVLGFRFSR  60
   61 LVFFFLFSTS STNLYSLPFR PDLPVKHLDV HTIGRTLDPG ANGTTVVATA TKSSRVVVGR 120
  121 HGIRIRPWPH PNPVEVMKAH QIIGRVQKEQ KMIFGMKSSK MVIAVTPTYV RTFQALHLTG 180
  181 VMHSLMLVPY DLVWIVVEAG GATNETGLII AKSGLRTIHV GIDQRMPNTW EDRSKLEVFM 240
  241 RLQALRVVRE EKLDGIVMFA DDSNMHSMEL FDEIQNVKWF GTVSVGILAH SGNAEEMVLS 300
  301 MEKRKEMEKE EEEESSSLPV QGPACNSTDQ LIGWHIFNTL PYAGKSAVYI DDVAAVLPQK 360
  361 LEWSGFVLNS RLLWEEAENK PEWVKDFGSL NENEGVESPL SLLKDPSMVE PLGSCGRQVL 420
  421 LWWLRVEARA DSKFPPGWII DPPLEITVAA KRTPWPDVPP EPPTKKKDQM PLSQGNTVVV 480
  481 IPKQQQHPTK IRKPKRKSKK SKHEPRPTDT TTQVYSSSSK HQERN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle