YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|240255790, gi...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQKSFFRLI FLIVTAGFII SFTSTNFPHA PTRLLDCTDS SSSPLCASRN FLFNKQQPRP  60
   61 IPKHDPKPNT KNHDHVSDTP NHPLDPLTVS EINKIRSILS SHALFTSGTP HALHTVVLEE 120
  121 PEKNLVRHWE KGNPLPPRKA SVIARVGADT HVLTVDISTG RVDSENSPVR VSGYPMMTIE 180
  181 EMNDITVVPF SNADFNRTII SRGVNLTDVI CFPISCGWFG NKEENARVIK SQCFMTQGTP 240
  241 NFYMRPIEGL TILIDLDTKQ VIEITDTGRA IPIPGSTNTD YRFQKLATTD KTRPLNPISI 300
  301 EQPRGPSFVI EDNHLVKWAN WEFHLKPDPR AGVVISRVRV HDPDTHETRD VMYKGFVSEL 360
  361 FVPYMDPSDA WYFKTYMDAG EYGFGLQAMP LVPLNDCPRN AAYMDGVFAA ADGTPFVREN 420
  421 MVCIFESYAG DIGWRHSESP ITGIPIREVR PKVTLVVRMA ASVGNYDYII DYEFQTDGLI 480
  481 KAKVGLSGIL MVKGTTYQNK NQVEKDKDGN EEELHGTLLS ENVIGVIHDH YVTFYLDLDV 540
  541 DGPDNSFVKV NLKRQETEPG ESPRKSYLKA VRNIAKTEKD GQIKLSLYDP SEFHVINSGK 600
  601 TTRVGNPTGY KVVPRTTAAS LLDHDDPPQK RGAFTNNQIW VTPYNKSEQW AGGLFTYQSH 660
  661 GDDTLAVWSD RDRDIENKDI VVWYTLGFHH IPCQEDFPIM PTVSSSFDLK PVNFFERNPI 720
  721 LSAAPNFEHD LPVCGVQSVS A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle