YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LIP1_KLULA
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQQNKNRV YILLQYVLAA LVLIAAVEYF KYKTRISYEW FHCTVQSEEL FDHPEGSPLK  60
   61 LWAIGGPSCD KRGELKTIMK RITMDFDPNV EPVKFCIVED TKVKSIHYPI EDGNKGDPGY 120
  121 ISFVGYERDS DVVEQACASY AATVFNL

Type	Start	End	Confidence
Cytoplasmic	1	9	0.51
Transmembrane Helix	10	30	0.67
Non-Cytoplasmic	31	147	0.79