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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49640547, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLQNWIPVL LLAAIVTAEV DFEVNPVDNE TESVQQDVID ESWNAEPGES SRITQSSKFL  60
   61 SLEHPIEYNF REHLDLTPLP NNFLLASFQF YMQSEPFGID RDQHESSEYS HHTVFPKPVG 120
  121 PIMSQTNTRQ LHLRFTHGLW DSQEWGQLPH NGLKSGGTGV ELWAIVEAPS KEEALKSWIT 180
  181 LANSLSGLFC ASINFIDTSK TTFPVSSFLP KEDEAIPLLN QSNHLYLMRA TLANEPVCTE 240
  241 NLTPFVKLLP TRGKSGISSL LDGHKIFDSN WHSLSIDVNT VCDESTANCH FVMEEFIETV 300
  301 VNVPNALARA DRPIPKPLPG DELRCDTNRP HDAFQCFPLP QSKEVSFSIS KLFGKKIRGG 360
  361 SLLGEQSSKI CVHVPSHWDV MIQVDESYFA TDDNCFDLNN NKPHDVRLET TDSKSVLPSK 420
  421 KTPIYVSRAL TGYGQDRGGL RSVFRNPSNE AVELVYFESL PWFMGVYLSS LAIESDDPEL 480
  481 TLDSVVKSTF YSPARDRERP THLERAMIIP PNTAFAISFQ FDKSLLKYAE YPPDANHGFE 540
  541 IEAAVAAVLT PERYEARTSS LLLSLSTPDF SMPYNVIILT STVMGLAFGT LFNLISKQLI 600
  601 TLEEADKILA STGPRAKLLR VKAKIVNMLQ GNKNKIIKSA KYE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle