YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49640423, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQALDILAS LFAVATVAAQ SSNQVQSYNL IEFGNVGFTG SYTNVKKISD AEEDSCSCTV  60
   61 GDRVWFSGDN APLNEALSVH LRGPLSLSKF AFYTSPSFDI NDSSSTSWSR EAYYDSTSQT 120
  121 AENVTFLTGA GDSSPCLGKA LTFASENGTG KADDSTILES NNLLASDEEV IIFSNVSCPK 180
  181 SGYDKGCGVY RSGIPAYYGF EGDTKMFLFE FTMPTATEKN SSSIDYYDMP AIWLLNDHIP 240
  241 RTAQYPSSSS SNCSCWASGC GEFDIFEVMN GTEKNHLYST FHTFQGIEDL GTGIQAGGYI 300
  301 ARDTSATMKG GVLFDSSGNT VVFMSNDTVF DSSIDYDTIN TLISNIDDDE TYSTELATIS 360
  361 ATAPTSTSKS GAAIMIKPSA GTIRYLLLSA LMSVFNLMV

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	399	0.99