YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAM17_KLULA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLGINLQN RLLVGLNGQS LLKRAVTRNA VAIRMNSTNA GKTASHEMTW PEFFKLRKKE  60
   61 RVFNTASSVA TAIVFVNGSW FYFSTLEIDP TQTIFGFDPL MAITAGMITC AAVGWLLGPI 120
  121 VGTALFKATS GPKLLQFQEK QLSFLAKIQK NRVNPQSQSF SNPVPDYYGE KINSIPQYRQ 180
  181 WLRDCHSYKR KASEFL

Type	Start	End	Confidence
Cytoplasmic	1	61	0.99
Transmembrane Helix	62	83	0.93
Non-Cytoplasmic	84	100	0.89
Transmembrane Helix	101	126	0.85
Cytoplasmic	127	196	0.99