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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49640161, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVIDDRNTA VPMSRSLSRR SPSILVTDAR SNKNRPSAPF AGHAAGMRNV SSVPRSAASS  60
   61 GGKTDSKGSR VRRRGYDMHG DKKSISSRFS DVSMDNLLLD VSDVPSGRRQ ERLSTSSYDM 120
  121 FPRNRQRGTH ITKMINPLPT RTSKTSQKLV LIPDEAHDSR NINQFRKRAN KTQRAKSSSK 180
  181 TKMDKEVDLP RITAYNVAEG FNLSLTSTFM KQTHDVLPRL YDECLYVPYT LPLLPGKDGF 240
  241 RIKSNISKKT QGGKSIIDYL IDTSERRDHH YEYFSGVETL EDVNNNYELD EGGVTNNLNA 300
  301 ENTPDHLPNP PVNTSVSFDP SEPQYFAEEN NAEAELEAFN EINGKTSLFQ QQHAEIFIFS 360
  361 YGVVVFWNFT EIQEKNILGD ISFSSYKNMV LKPLDEQDIE IESFHFEYDM DTERPRIFND 420
  421 IVTLRSGDHL TALTLSHAIA QSVKLSRFEA RIVPIFGSVS KLPKRLALYG TLGLKREQLL 480
  481 KKSGKLFKLR VDVNLSSSVL DTPEFFWSFE PSLHSLYQAM REYLEIDPRV QVLNDRCKVF 540
  541 LEFFDICVDS IAERNMARIT WWFITIIFIS VLISIVEILV RYFIIKKHTG T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle